Dca33528.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3424)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33528.1 |
58 |
487 |
487 |
36.96 |
430 |
37 |
5e-82
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
58 |
550 |
1501 |
32.84 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33528.1 |
60 |
211 |
487 |
9.24 |
152 |
30 |
2e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
104 |
255 |
296 |
51.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3424 |
Augustus |
mRNA |
26315 |
28323 |
. |
+ |
. |
ID=Dca33528.1;Parent=Dca33528 |
| scaffold3424 |
Augustus |
exon |
26315 |
26389 |
. |
+ |
. |
ID=Dca33528.1.exon1;Parent=Dca33528.1 |
| scaffold3424 |
Augustus |
exon |
26763 |
26860 |
. |
+ |
. |
ID=Dca33528.1.exon2;Parent=Dca33528.1 |
| scaffold3424 |
Augustus |
exon |
26945 |
28136 |
. |
+ |
. |
ID=Dca33528.1.exon3;Parent=Dca33528.1 |
| scaffold3424 |
Augustus |
exon |
28225 |
28323 |
. |
+ |
. |
ID=Dca33528.1.exon4;Parent=Dca33528.1 |
