Dca33566.1
Annotation
- 4-exons
- f-1
- sp|G7KEM5_MEDTR#40S ribosomal protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g097200#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- Repeat List (scaffold343)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33566.1 |
1 |
123 |
125 |
81.59 |
123 |
82 |
4e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G7KEM5_MEDTR |
102 |
226 |
230 |
54.34 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33566.1 |
1 |
114 |
125 |
74.4 |
114 |
82 |
4e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G40510.1 |
2 |
115 |
133 |
85.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold343 |
Augustus |
mRNA |
47582 |
49859 |
. |
+ |
. |
ID=Dca33566.1;Parent=Dca33566 |
| scaffold343 |
Augustus |
exon |
47582 |
47674 |
. |
+ |
. |
ID=Dca33566.1.exon1;Parent=Dca33566.1 |
| scaffold343 |
Augus-PASA |
exon |
48554 |
48638 |
. |
+ |
. |
ID=Dca33566.1.exon2;Parent=Dca33566.1 |
| scaffold343 |
Augus-PASA |
exon |
48966 |
49099 |
. |
+ |
. |
ID=Dca33566.1.exon3;Parent=Dca33566.1 |
| scaffold343 |
Augus-PASA |
exon |
49794 |
49859 |
. |
+ |
. |
ID=Dca33566.1.exon4;Parent=Dca33566.1 |
