Dca33720.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold345)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33720.1 |
291 |
1347 |
1362 |
48.97 |
1057 |
62 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
345 |
1430 |
1501 |
72.35 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33720.1 |
305 |
1334 |
1362 |
27.31 |
1030 |
36 |
1e-178
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
411 |
1410 |
1539 |
64.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold345 |
Augustus |
mRNA |
163138 |
167491 |
. |
- |
. |
ID=Dca33720.1;Parent=Dca33720 |
| scaffold345 |
Augustus |
exon |
163138 |
163815 |
. |
- |
. |
ID=Dca33720.1.exon1;Parent=Dca33720.1 |
| scaffold345 |
Augustus |
exon |
163897 |
166472 |
. |
- |
. |
ID=Dca33720.1.exon2;Parent=Dca33720.1 |
| scaffold345 |
Augustus |
exon |
166657 |
167491 |
. |
- |
. |
ID=Dca33720.1.exon3;Parent=Dca33720.1 |
