Carnation DB

Dca33839.1

Annotation

7-exons
f-1
sp|B9HZQ9_POPTR#Aminotransferase family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=AMT7#GO:0016847;GO:0030170#2F0P0C
Repeat List (scaffold347)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33839.1	1	370	386	67.09	370	70	9e-166
Target_name	Start	End	Length	Cov(%)
sp\|B9HZQ9_POPTR	44	413	417	88.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33839.1	1	371	386	65.28	371	68	1e-158
Target_name	Start	End	Length	Cov(%)
AT5G53970.1	40	410	414	89.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold347	Augus-PASA	mRNA	21159	23209	.	-	.	ID=Dca33839.1;Parent=Dca33839
scaffold347	Augus-PASA	exon	21159	21322	.	-	.	ID=Dca33839.1.exon1;Parent=Dca33839.1
scaffold347	Augus-PASA	exon	21449	21542	.	-	.	ID=Dca33839.1.exon2;Parent=Dca33839.1
scaffold347	Augus-PASA	exon	21627	21782	.	-	.	ID=Dca33839.1.exon3;Parent=Dca33839.1
scaffold347	Augus-PASA	exon	21916	21975	.	-	.	ID=Dca33839.1.exon4;Parent=Dca33839.1
scaffold347	Augus-PASA	exon	22055	22273	.	-	.	ID=Dca33839.1.exon5;Parent=Dca33839.1
scaffold347	Augus-PASA	exon	22349	22688	.	-	.	ID=Dca33839.1.exon6;Parent=Dca33839.1
scaffold347	Augus-PASA	exon	23082	23209	.	-	.	ID=Dca33839.1.exon7;Parent=Dca33839.1