Dca33895.1
Annotation
- 4-exons
- f-1
- sp|B9IF22_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_666563#GO:0004197;GO:0006508#1F1P0C
- AT5G50260.1 | Symbols: | Cysteine proteinases superfamily protein | chr5:20455605-20456862 FORWARD LENGTH=361
- Repeat List (scaffold3479)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33895.1 |
1 |
62 |
74 |
32.43 |
62 |
39 |
5e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RGG8_RICCO |
280 |
340 |
362 |
16.85 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33895.1 |
5 |
358 |
358 |
66.2 |
354 |
66 |
2e-144
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G50260.1 |
2 |
361 |
361 |
99.72 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3479 |
Augustus |
mRNA |
16837 |
18888 |
. |
- |
. |
ID=Dca33895.1;Parent=Dca33895 |
| scaffold3479 |
Augustus |
exon |
16837 |
17085 |
. |
- |
. |
ID=Dca33895.1.exon1;Parent=Dca33895.1 |
| scaffold3479 |
Augustus |
exon |
17672 |
17812 |
. |
- |
. |
ID=Dca33895.1.exon2;Parent=Dca33895.1 |
| scaffold3479 |
Augustus |
exon |
17912 |
18147 |
. |
- |
. |
ID=Dca33895.1.exon3;Parent=Dca33895.1 |
| scaffold3479 |
Augustus |
exon |
18438 |
18888 |
. |
- |
. |
ID=Dca33895.1.exon4;Parent=Dca33895.1 |
