Carnation DB

Dca33906.1

Annotation

9-exons
f-1
sp|D7STL5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0008g00720#GO:0004197;GO:0006508#1F1P0C
sp|C4P6Z4_9ROSA#Vacuolar processing enzyme#Malus hupehensis var mengshanensis#Name=VPE#GO:0004197;GO:0006508#1F1P0C
Repeat List (scaffold348)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33906.1	46	468	471	54.35	423	60	2e-156
Target_name	Start	End	Length	Cov(%)
sp\|D7STL5_VITVI	50	476	493	86.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33906.1	53	468	471	51.38	416	58	2e-150
Target_name	Start	End	Length	Cov(%)
Os01t0559600-01	64	484	502	83.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold348	Augus-PASA	mRNA	78714	83567	.	-	.	ID=Dca33906.1;Parent=Dca33906
scaffold348	Augus-PASA	exon	78714	78854	.	-	.	ID=Dca33906.1.exon1;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	79147	79350	.	-	.	ID=Dca33906.1.exon2;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	80056	80256	.	-	.	ID=Dca33906.1.exon3;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	81096	81144	.	-	.	ID=Dca33906.1.exon4;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	81416	81615	.	-	.	ID=Dca33906.1.exon5;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	81725	81810	.	-	.	ID=Dca33906.1.exon6;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	82526	82682	.	-	.	ID=Dca33906.1.exon7;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	82790	82954	.	-	.	ID=Dca33906.1.exon8;Parent=Dca33906.1
scaffold348	Augus-PASA	exon	83355	83567	.	-	.	ID=Dca33906.1.exon9;Parent=Dca33906.1