Dca3394.1
Annotation
- 4-exons
- f-1
- sp|B9RTX2_RICCO#Short chain dehydrogenase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0913590#GO:0004316;GO:0000166#2F0P0C
- Repeat List (scaffold112)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3394.1 |
11 |
291 |
317 |
58.99 |
281 |
67 |
4e-111
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9RTX2_RICCO |
10 |
288 |
295 |
94.57 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3394.1 |
3 |
291 |
317 |
54.88 |
289 |
61 |
3e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G54870.1 |
42 |
328 |
335 |
85.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold112 |
Augustus |
mRNA |
273002 |
275205 |
. |
+ |
. |
ID=Dca3394.1;Parent=Dca3394 |
| scaffold112 |
Augustus |
exon |
273002 |
273133 |
. |
+ |
. |
ID=Dca3394.1.exon1;Parent=Dca3394.1 |
| scaffold112 |
Augustus |
exon |
273367 |
273743 |
. |
+ |
. |
ID=Dca3394.1.exon2;Parent=Dca3394.1 |
| scaffold112 |
Augustus |
exon |
273851 |
274215 |
. |
+ |
. |
ID=Dca3394.1.exon3;Parent=Dca3394.1 |
| scaffold112 |
Augustus |
exon |
275126 |
275205 |
. |
+ |
. |
ID=Dca3394.1.exon4;Parent=Dca3394.1 |
