Dca33942.1
Annotation
- 2-exons
- f-1
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3484)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33942.1 |
3 |
420 |
1530 |
10.45 |
418 |
36 |
5e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2AA50_ASPOF |
246 |
680 |
1788 |
24.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca33942.1 |
977 |
1428 |
1530 |
10.58 |
452 |
36 |
2e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
1003 |
1539 |
27.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3484 |
Augustus |
mRNA |
107 |
4793 |
. |
- |
. |
ID=Dca33942.1;Parent=Dca33942 |
| scaffold3484 |
Augustus |
exon |
107 |
3388 |
. |
- |
. |
ID=Dca33942.1.exon1;Parent=Dca33942.1 |
| scaffold3484 |
Augustus |
exon |
3486 |
4793 |
. |
- |
. |
ID=Dca33942.1.exon2;Parent=Dca33942.1 |
