Carnation DB

Dca33964.1

Annotation

6-exons
f-64
sp|B9SSL4_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0985450#GO:0005488;GO:0016874#2F0P0C
Repeat List (scaffold3488)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33964.1	31	2126	2127	81.24	2096	83	0
Target_name	Start	End	Length	Cov(%)
sp\|B9SSL4_RICCO	1	2098	2098	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca33964.1	1	2126	2127	77.57	2126	78	0
Target_name	Start	End	Length	Cov(%)
AT2G22125.1	23	2150	2150	98.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3488	Augustus	mRNA	13550	22045	.	-	.	ID=Dca33964.1;Parent=Dca33964
scaffold3488	Augustus	exon	13550	13693	.	-	.	ID=Dca33964.1.exon1;Parent=Dca33964.1
scaffold3488	Augustus	exon	14282	14398	.	-	.	ID=Dca33964.1.exon2;Parent=Dca33964.1
scaffold3488	Augustus	exon	14595	15049	.	-	.	ID=Dca33964.1.exon3;Parent=Dca33964.1
scaffold3488	Augustus	exon	15483	18027	.	-	.	ID=Dca33964.1.exon4;Parent=Dca33964.1
scaffold3488	Augustus	exon	18529	21577	.	-	.	ID=Dca33964.1.exon5;Parent=Dca33964.1
scaffold3488	Augustus	exon	21972	22045	.	-	.	ID=Dca33964.1.exon6;Parent=Dca33964.1