Dca34038.1
Annotation
- 3-exons
- f-3
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold3498)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34038.1 |
1 |
860 |
1672 |
34.56 |
860 |
64 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
292 |
1173 |
1717 |
51.36 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34038.1 |
551 |
850 |
1672 |
6.33 |
300 |
36 |
1e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
580 |
855 |
1539 |
17.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3498 |
Augustus |
mRNA |
1 |
5247 |
. |
+ |
. |
ID=Dca34038.1;Parent=Dca34038 |
| scaffold3498 |
Augustus |
exon |
1 |
1257 |
. |
+ |
. |
ID=Dca34038.1.exon1;Parent=Dca34038.1 |
| scaffold3498 |
Augustus |
exon |
1371 |
4415 |
. |
+ |
. |
ID=Dca34038.1.exon2;Parent=Dca34038.1 |
| scaffold3498 |
Augustus |
exon |
4529 |
5247 |
. |
+ |
. |
ID=Dca34038.1.exon3;Parent=Dca34038.1 |
