Carnation DB

Dca34080.1

Annotation

7-exons
f-1
sp|B9T459_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0290900#GO:0005634;GO:0004721#1F0P1C
AT4G06599.1 | Symbols: | ubiquitin family protein | chr4:3666079-3667495 REVERSE LENGTH=340
Repeat List (scaffold35)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34080.1	36	316	316	75.31	281	85	5e-139
Target_name	Start	End	Length	Cov(%)
sp\|B9T459_RICCO	63	339	339	81.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34080.1	36	315	316	70.25	280	80	1e-125
Target_name	Start	End	Length	Cov(%)
AT4G06599.1	64	339	340	81.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold35	Augustus	mRNA	327368	331452	.	+	.	ID=Dca34080.1;Parent=Dca34080
scaffold35	Augustus	exon	327368	327472	.	+	.	ID=Dca34080.1.exon1;Parent=Dca34080.1
scaffold35	Augustus	exon	327581	327681	.	+	.	ID=Dca34080.1.exon2;Parent=Dca34080.1
scaffold35	Augus-PASA	exon	328477	328621	.	+	.	ID=Dca34080.1.exon3;Parent=Dca34080.1
scaffold35	Augus-PASA	exon	329232	329346	.	+	.	ID=Dca34080.1.exon4;Parent=Dca34080.1
scaffold35	Augus-PASA	exon	329431	329494	.	+	.	ID=Dca34080.1.exon5;Parent=Dca34080.1
scaffold35	Augustus	exon	330436	330601	.	+	.	ID=Dca34080.1.exon6;Parent=Dca34080.1
scaffold35	Augustus	exon	331198	331452	.	+	.	ID=Dca34080.1.exon7;Parent=Dca34080.1