Carnation DB

Dca34166.1

Annotation

8-exons
f-1
sp|C5WW65_SORBI#Putative uncharacterized protein Sb01g004430#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb01g004430#GO:0005737;GO:0003746;GO:0043043#1F1P1C
sp|Q84M44_ORYSJ#Putative translation elongation factor P#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0059E14.23#GO:0005737;GO:0003746;GO:0043043#1F1P1C
Repeat List (scaffold351)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34166.1	35	223	225	56.44	189	68	9e-75
Target_name	Start	End	Length	Cov(%)
sp\|C5WW65_SORBI	57	245	246	76.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34166.1	34	199	225	41.77	166	57	9e-53
Target_name	Start	End	Length	Cov(%)
AT4G26310.2	66	231	261	63.6

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold351	Augustus	mRNA	111341	113633	.	-	.	ID=Dca34166.1;Parent=Dca34166
scaffold351	Augustus	exon	111341	111350	.	-	.	ID=Dca34166.1.exon1;Parent=Dca34166.1
scaffold351	Augustus	exon	111939	112006	.	-	.	ID=Dca34166.1.exon2;Parent=Dca34166.1
scaffold351	Augustus	exon	112541	112580	.	-	.	ID=Dca34166.1.exon3;Parent=Dca34166.1
scaffold351	Augustus	exon	112728	112851	.	-	.	ID=Dca34166.1.exon4;Parent=Dca34166.1
scaffold351	Augustus	exon	112947	113014	.	-	.	ID=Dca34166.1.exon5;Parent=Dca34166.1
scaffold351	Augustus	exon	113089	113155	.	-	.	ID=Dca34166.1.exon6;Parent=Dca34166.1
scaffold351	Augustus	exon	113240	113405	.	-	.	ID=Dca34166.1.exon7;Parent=Dca34166.1
scaffold351	Augustus	exon	113499	113633	.	-	.	ID=Dca34166.1.exon8;Parent=Dca34166.1