Dca34436.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3550)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34436.1 |
282 |
635 |
635 |
29.76 |
354 |
47 |
1e-101
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
990 |
1392 |
1553 |
25.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca34436.1 |
317 |
635 |
635 |
17.32 |
319 |
31 |
2e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
991 |
1353 |
1539 |
23.58 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3550 |
Augustus |
mRNA |
1145 |
5473 |
. |
+ |
. |
ID=Dca34436.1;Parent=Dca34436 |
| scaffold3550 |
Augustus |
exon |
1145 |
1420 |
. |
+ |
. |
ID=Dca34436.1.exon1;Parent=Dca34436.1 |
| scaffold3550 |
Augustus |
exon |
1608 |
2247 |
. |
+ |
. |
ID=Dca34436.1.exon2;Parent=Dca34436.1 |
| scaffold3550 |
Augustus |
exon |
4352 |
4635 |
. |
+ |
. |
ID=Dca34436.1.exon3;Parent=Dca34436.1 |
| scaffold3550 |
Augustus |
exon |
4766 |
5473 |
. |
+ |
. |
ID=Dca34436.1.exon4;Parent=Dca34436.1 |
