Carnation DB

Dca34479.1

Annotation

8-exons
f-1
sp|F6HQN4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0040g01170#GO:0003824#1F0P0C
sp|B9RU86_RICCO#Hydroxymethylglutaryl-CoA lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1635180#GO:0004419#1F0P0C
Repeat List (scaffold3557)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34479.1	88	403	403	62.03	316	79	2e-146
Target_name	Start	End	Length	Cov(%)
sp\|F6HQN4_VITVI	80	396	396	80.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca34479.1	101	403	403	60.04	303	80	5e-141
Target_name	Start	End	Length	Cov(%)
AT2G26800.2	164	468	468	65.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3557	Augustus	mRNA	28544	31062	.	+	.	ID=Dca34479.1;Parent=Dca34479
scaffold3557	Augustus	exon	28544	28695	.	+	.	ID=Dca34479.1.exon1;Parent=Dca34479.1
scaffold3557	Augustus	exon	28888	29017	.	+	.	ID=Dca34479.1.exon2;Parent=Dca34479.1
scaffold3557	Augustus	exon	29128	29313	.	+	.	ID=Dca34479.1.exon3;Parent=Dca34479.1
scaffold3557	Augustus	exon	29587	29664	.	+	.	ID=Dca34479.1.exon4;Parent=Dca34479.1
scaffold3557	Augustus	exon	29771	29934	.	+	.	ID=Dca34479.1.exon5;Parent=Dca34479.1
scaffold3557	Augustus	exon	30011	30147	.	+	.	ID=Dca34479.1.exon6;Parent=Dca34479.1
scaffold3557	Augustus	exon	30451	30566	.	+	.	ID=Dca34479.1.exon7;Parent=Dca34479.1
scaffold3557	Augustus	exon	30814	31062	.	+	.	ID=Dca34479.1.exon8;Parent=Dca34479.1