Dca35097.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3631)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35097.1 |
1 |
414 |
415 |
38.31 |
414 |
36 |
2e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
227 |
660 |
1313 |
33.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35097.1 |
166 |
269 |
415 |
8.91 |
104 |
35 |
3e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
500 |
606 |
1428 |
7.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3631 |
Augustus |
mRNA |
37178 |
38874 |
. |
- |
. |
ID=Dca35097.1;Parent=Dca35097 |
| scaffold3631 |
Augustus |
exon |
37178 |
37929 |
. |
- |
. |
ID=Dca35097.1.exon1;Parent=Dca35097.1 |
| scaffold3631 |
Augustus |
exon |
38278 |
38308 |
. |
- |
. |
ID=Dca35097.1.exon2;Parent=Dca35097.1 |
| scaffold3631 |
Augustus |
exon |
38410 |
38874 |
. |
- |
. |
ID=Dca35097.1.exon3;Parent=Dca35097.1 |
