Carnation DB

Dca3526.1

Annotation

13-exons
f-1
sp|B9HLX7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1084331#unknown#0F0P0C
AT3G55510.1 | Symbols: RBL | Noc2p family | chr3:20579232-20582124 FORWARD LENGTH=594
Repeat List (scaffold1126)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3526.1	175	689	722	37.39	515	52	7e-157
Target_name	Start	End	Length	Cov(%)
sp\|B9HLX7_POPTR	101	610	624	81.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3526.1	157	659	722	31.85	503	46	2e-124
Target_name	Start	End	Length	Cov(%)
AT3G55510.1	81	585	594	85.01

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1126	Augustus	mRNA	32511	38181	.	-	.	ID=Dca3526.1;Parent=Dca3526
scaffold1126	Augustus	exon	32511	32667	.	-	.	ID=Dca3526.1.exon1;Parent=Dca3526.1
scaffold1126	Augustus	exon	33129	33226	.	-	.	ID=Dca3526.1.exon2;Parent=Dca3526.1
scaffold1126	Augustus	exon	33314	33403	.	-	.	ID=Dca3526.1.exon3;Parent=Dca3526.1
scaffold1126	Augustus	exon	33511	33717	.	-	.	ID=Dca3526.1.exon4;Parent=Dca3526.1
scaffold1126	Augustus	exon	34231	34554	.	-	.	ID=Dca3526.1.exon5;Parent=Dca3526.1
scaffold1126	Augustus	exon	34888	35187	.	-	.	ID=Dca3526.1.exon6;Parent=Dca3526.1
scaffold1126	Augustus	exon	35428	35934	.	-	.	ID=Dca3526.1.exon7;Parent=Dca3526.1
scaffold1126	Augustus	exon	36179	36247	.	-	.	ID=Dca3526.1.exon8;Parent=Dca3526.1
scaffold1126	Augustus	exon	36716	36810	.	-	.	ID=Dca3526.1.exon9;Parent=Dca3526.1
scaffold1126	Augustus	exon	36913	36961	.	-	.	ID=Dca3526.1.exon10;Parent=Dca3526.1
scaffold1126	Augustus	exon	37103	37211	.	-	.	ID=Dca3526.1.exon11;Parent=Dca3526.1
scaffold1126	Augustus	exon	37550	37627	.	-	.	ID=Dca3526.1.exon12;Parent=Dca3526.1
scaffold1126	Augustus	exon	38096	38181	.	-	.	ID=Dca3526.1.exon13;Parent=Dca3526.1