Carnation DB

Dca35480.1

Annotation

54-exons
f-1
sp|B9HSM0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_567249#GO:0030132;GO:0030130;GO:0005488;GO:0005198;GO:0006886;GO:0016192#2F2P2C
Repeat List (scaffold369)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35480.1	1	823	2636	26.63	823	86	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HSM0_POPTR	1	820	1705	48.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35480.1	1	823	2636	26.4	823	85	0
Target_name	Start	End	Length	Cov(%)
AT3G11130.1	1	820	1705	48.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold369	Augustus	mRNA	80354	104799	.	+	.	ID=Dca35480.1;Parent=Dca35480
scaffold369	Augustus	exon	80354	80398	.	+	.	ID=Dca35480.1.exon1;Parent=Dca35480.1
scaffold369	Augustus	exon	80649	80853	.	+	.	ID=Dca35480.1.exon2;Parent=Dca35480.1
scaffold369	Augustus	exon	82932	83029	.	+	.	ID=Dca35480.1.exon3;Parent=Dca35480.1
scaffold369	Augustus	exon	83232	83310	.	+	.	ID=Dca35480.1.exon4;Parent=Dca35480.1
scaffold369	Augustus	exon	83433	83560	.	+	.	ID=Dca35480.1.exon5;Parent=Dca35480.1
scaffold369	Augustus	exon	84161	84259	.	+	.	ID=Dca35480.1.exon6;Parent=Dca35480.1
scaffold369	Augustus	exon	84361	84469	.	+	.	ID=Dca35480.1.exon7;Parent=Dca35480.1
scaffold369	Augustus	exon	84621	84700	.	+	.	ID=Dca35480.1.exon8;Parent=Dca35480.1
scaffold369	Augustus	exon	84786	85013	.	+	.	ID=Dca35480.1.exon9;Parent=Dca35480.1
scaffold369	Augustus	exon	85109	85174	.	+	.	ID=Dca35480.1.exon10;Parent=Dca35480.1
scaffold369	Augustus	exon	85306	85422	.	+	.	ID=Dca35480.1.exon11;Parent=Dca35480.1
scaffold369	Augustus	exon	86078	86275	.	+	.	ID=Dca35480.1.exon12;Parent=Dca35480.1
scaffold369	Augustus	exon	86390	86506	.	+	.	ID=Dca35480.1.exon13;Parent=Dca35480.1
scaffold369	Augustus	exon	86659	86718	.	+	.	ID=Dca35480.1.exon14;Parent=Dca35480.1
scaffold369	Augustus	exon	86811	86897	.	+	.	ID=Dca35480.1.exon15;Parent=Dca35480.1
scaffold369	Augustus	exon	87112	87195	.	+	.	ID=Dca35480.1.exon16;Parent=Dca35480.1
scaffold369	Augustus	exon	87287	87421	.	+	.	ID=Dca35480.1.exon17;Parent=Dca35480.1
scaffold369	Augustus	exon	87518	87580	.	+	.	ID=Dca35480.1.exon18;Parent=Dca35480.1
scaffold369	Augustus	exon	87662	87766	.	+	.	ID=Dca35480.1.exon19;Parent=Dca35480.1
scaffold369	Augustus	exon	87873	87985	.	+	.	ID=Dca35480.1.exon20;Parent=Dca35480.1
scaffold369	Augustus	exon	88098	88350	.	+	.	ID=Dca35480.1.exon21;Parent=Dca35480.1
scaffold369	Augustus	exon	88663	88782	.	+	.	ID=Dca35480.1.exon22;Parent=Dca35480.1
scaffold369	Augustus	exon	89072	89204	.	+	.	ID=Dca35480.1.exon23;Parent=Dca35480.1
scaffold369	Augustus	exon	89342	89416	.	+	.	ID=Dca35480.1.exon24;Parent=Dca35480.1
scaffold369	Augustus	exon	91117	91163	.	+	.	ID=Dca35480.1.exon25;Parent=Dca35480.1
scaffold369	Augustus	exon	91383	91587	.	+	.	ID=Dca35480.1.exon26;Parent=Dca35480.1
scaffold369	Augustus	exon	94073	94161	.	+	.	ID=Dca35480.1.exon27;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	94395	94473	.	+	.	ID=Dca35480.1.exon28;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	94599	94726	.	+	.	ID=Dca35480.1.exon29;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	95322	95420	.	+	.	ID=Dca35480.1.exon30;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	95520	95628	.	+	.	ID=Dca35480.1.exon31;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	95806	95885	.	+	.	ID=Dca35480.1.exon32;Parent=Dca35480.1
scaffold369	Augustus	exon	96014	96241	.	+	.	ID=Dca35480.1.exon33;Parent=Dca35480.1
scaffold369	Augustus	exon	96337	96402	.	+	.	ID=Dca35480.1.exon34;Parent=Dca35480.1
scaffold369	Augustus	exon	96530	96646	.	+	.	ID=Dca35480.1.exon35;Parent=Dca35480.1
scaffold369	Augustus	exon	98057	98254	.	+	.	ID=Dca35480.1.exon36;Parent=Dca35480.1
scaffold369	Augustus	exon	98367	98483	.	+	.	ID=Dca35480.1.exon37;Parent=Dca35480.1
scaffold369	Augustus	exon	98636	98695	.	+	.	ID=Dca35480.1.exon38;Parent=Dca35480.1
scaffold369	Augustus	exon	98809	98895	.	+	.	ID=Dca35480.1.exon39;Parent=Dca35480.1
scaffold369	Augustus	exon	99099	99182	.	+	.	ID=Dca35480.1.exon40;Parent=Dca35480.1
scaffold369	Augustus	exon	99274	99408	.	+	.	ID=Dca35480.1.exon41;Parent=Dca35480.1
scaffold369	Augustus	exon	99505	99567	.	+	.	ID=Dca35480.1.exon42;Parent=Dca35480.1
scaffold369	Augustus	exon	99648	99752	.	+	.	ID=Dca35480.1.exon43;Parent=Dca35480.1
scaffold369	Augustus	exon	99893	100005	.	+	.	ID=Dca35480.1.exon44;Parent=Dca35480.1
scaffold369	Augustus	exon	100102	100354	.	+	.	ID=Dca35480.1.exon45;Parent=Dca35480.1
scaffold369	Augustus	exon	100470	100606	.	+	.	ID=Dca35480.1.exon46;Parent=Dca35480.1
scaffold369	Augustus	exon	100696	100974	.	+	.	ID=Dca35480.1.exon47;Parent=Dca35480.1
scaffold369	Augustus	exon	101057	102059	.	+	.	ID=Dca35480.1.exon48;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	102606	103091	.	+	.	ID=Dca35480.1.exon49;Parent=Dca35480.1
scaffold369	Augus-PASA	exon	103191	103361	.	+	.	ID=Dca35480.1.exon50;Parent=Dca35480.1
scaffold369	Augustus	exon	103527	103712	.	+	.	ID=Dca35480.1.exon51;Parent=Dca35480.1
scaffold369	Augustus	exon	103825	103947	.	+	.	ID=Dca35480.1.exon52;Parent=Dca35480.1
scaffold369	Augustus	exon	104124	104234	.	+	.	ID=Dca35480.1.exon53;Parent=Dca35480.1
scaffold369	Augustus	exon	104644	104799	.	+	.	ID=Dca35480.1.exon54;Parent=Dca35480.1