Dca35485.1
Annotation
- 4-exons
- f-1
- sp|A5B919_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002640#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold3690)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35485.1 |
21 |
802 |
802 |
52.11 |
782 |
47 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B919_VITVI |
240 |
1133 |
1450 |
61.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35485.1 |
107 |
800 |
802 |
28.8 |
694 |
33 |
1e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
377 |
1069 |
1401 |
49.46 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3690 |
Augustus |
mRNA |
18686 |
21424 |
. |
- |
. |
ID=Dca35485.1;Parent=Dca35485 |
| scaffold3690 |
Augustus |
exon |
18686 |
19245 |
. |
- |
. |
ID=Dca35485.1.exon1;Parent=Dca35485.1 |
| scaffold3690 |
Augustus |
exon |
19327 |
20743 |
. |
- |
. |
ID=Dca35485.1.exon2;Parent=Dca35485.1 |
| scaffold3690 |
Augustus |
exon |
20849 |
21044 |
. |
- |
. |
ID=Dca35485.1.exon3;Parent=Dca35485.1 |
| scaffold3690 |
Augustus |
exon |
21189 |
21424 |
. |
- |
. |
ID=Dca35485.1.exon4;Parent=Dca35485.1 |
