Dca355.1
Annotation
- 3-exons
- f-1
- sp|B9GPY9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_409801#unknown#0F0P0C
- Repeat List (scaffold1003)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca355.1 |
1 |
35 |
63 |
36.5 |
35 |
66 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7UC49_VITVI |
434 |
468 |
646 |
5.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca355.1 |
1 |
55 |
63 |
39.68 |
55 |
46 |
7e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G01770.1 |
433 |
487 |
632 |
8.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1003 |
Augustus |
mRNA |
55896 |
56852 |
. |
- |
. |
ID=Dca355.1;Parent=Dca355 |
| scaffold1003 |
Augustus |
exon |
55896 |
56376 |
. |
- |
. |
ID=Dca355.1.exon1;Parent=Dca355.1 |
| scaffold1003 |
Augustus |
exon |
56669 |
56708 |
. |
- |
. |
ID=Dca355.1.exon2;Parent=Dca355.1 |
| scaffold1003 |
Augustus |
exon |
56825 |
56852 |
. |
- |
. |
ID=Dca355.1.exon3;Parent=Dca355.1 |
