Carnation DB

Dca35505.1

Annotation

5-exons
f-1
sp|B9N4X4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_581505#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
Os05t0481400-01 Transcriptional factor B3 family protein.
Repeat List (scaffold3694)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35505.1	62	488	488	29.71	427	34	4e-54
Target_name	Start	End	Length	Cov(%)
sp\|B9N4X4_POPTR	98	476	476	79.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35505.1	70	161	488	7.99	92	43	7e-20
Target_name	Start	End	Length	Cov(%)
Os05t0481400-01	133	224	280	32.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3694	Augustus	mRNA	21852	26220	.	+	.	ID=Dca35505.1;Parent=Dca35505
scaffold3694	Augustus	exon	21852	21971	.	+	.	ID=Dca35505.1.exon1;Parent=Dca35505.1
scaffold3694	Augustus	exon	24356	24387	.	+	.	ID=Dca35505.1.exon2;Parent=Dca35505.1
scaffold3694	Augustus	exon	24473	24593	.	+	.	ID=Dca35505.1.exon3;Parent=Dca35505.1
scaffold3694	Augustus	exon	24704	24910	.	+	.	ID=Dca35505.1.exon4;Parent=Dca35505.1
scaffold3694	Augustus	exon	25234	26220	.	+	.	ID=Dca35505.1.exon5;Parent=Dca35505.1