Dca35515.1
Annotation
- 4-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold3696)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35515.1 |
124 |
281 |
322 |
23.29 |
158 |
46 |
1e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
172 |
1501 |
11.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35515.1 |
145 |
282 |
322 |
13.04 |
138 |
31 |
6e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
217 |
296 |
46.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3696 |
Augustus |
mRNA |
20136 |
23409 |
. |
+ |
. |
ID=Dca35515.1;Parent=Dca35515 |
| scaffold3696 |
Augustus |
exon |
20136 |
20372 |
. |
+ |
. |
ID=Dca35515.1.exon1;Parent=Dca35515.1 |
| scaffold3696 |
Augustus |
exon |
20524 |
20604 |
. |
+ |
. |
ID=Dca35515.1.exon2;Parent=Dca35515.1 |
| scaffold3696 |
Augustus |
exon |
21352 |
21873 |
. |
+ |
. |
ID=Dca35515.1.exon3;Parent=Dca35515.1 |
| scaffold3696 |
Augustus |
exon |
23281 |
23409 |
. |
+ |
. |
ID=Dca35515.1.exon4;Parent=Dca35515.1 |
