Dca35545.1
Annotation
- 3-exons
- f-1
- sp|Q75H66_ORYSJ#Putative uncharacterized protein OSJNBb0007E22.22#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0007E22.22#GO:0008270#1F0P0C
- Os06t0704400-02 Transposase, MuDR, plant domain containing protein.
- Repeat List (scaffold37)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35545.1 |
445 |
757 |
819 |
13.55 |
313 |
36 |
4e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q75H66_ORYSJ |
540 |
851 |
981 |
31.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35545.1 |
369 |
756 |
819 |
15.62 |
388 |
33 |
8e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0704400-02 |
322 |
686 |
805 |
45.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold37 |
Augustus |
mRNA |
179769 |
182587 |
. |
+ |
. |
ID=Dca35545.1;Parent=Dca35545 |
| scaffold37 |
Augustus |
exon |
179769 |
181124 |
. |
+ |
. |
ID=Dca35545.1.exon1;Parent=Dca35545.1 |
| scaffold37 |
Augustus |
exon |
181231 |
181374 |
. |
+ |
. |
ID=Dca35545.1.exon2;Parent=Dca35545.1 |
| scaffold37 |
Augustus |
exon |
181628 |
182587 |
. |
+ |
. |
ID=Dca35545.1.exon3;Parent=Dca35545.1 |
