Carnation DB

Dca35556.1

Annotation

7-exons
f-1
sp|D7SPE0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_04s0023g01770#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
sp|B9S6H3_RICCO#AP-3 complex subunit sigma-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0536690#GO:0030117;GO:0008565;GO:0006886;GO:0016192#1F2P1C
Repeat List (scaffold37)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35556.1	3	95	168	45.23	93	82	9e-39
Target_name	Start	End	Length	Cov(%)
sp\|D7SPE0_VITVI	59	151	165	56.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35556.1	3	96	168	40.47	94	73	1e-36
Target_name	Start	End	Length	Cov(%)
AT3G50860.1	59	152	166	56.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold37	Augustus	mRNA	333051	336399	.	-	.	ID=Dca35556.1;Parent=Dca35556
scaffold37	Augustus	exon	333051	333102	.	-	.	ID=Dca35556.1.exon1;Parent=Dca35556.1
scaffold37	Augustus	exon	334286	334338	.	-	.	ID=Dca35556.1.exon2;Parent=Dca35556.1
scaffold37	Augustus	exon	335008	335121	.	-	.	ID=Dca35556.1.exon3;Parent=Dca35556.1
scaffold37	Augustus	exon	335690	335711	.	-	.	ID=Dca35556.1.exon4;Parent=Dca35556.1
scaffold37	Augustus	exon	335844	335935	.	-	.	ID=Dca35556.1.exon5;Parent=Dca35556.1
scaffold37	Augustus	exon	336019	336089	.	-	.	ID=Dca35556.1.exon6;Parent=Dca35556.1
scaffold37	Augustus	exon	336297	336399	.	-	.	ID=Dca35556.1.exon7;Parent=Dca35556.1