Carnation DB

Dca35702.1

Annotation

9-exons
f-1
sp|D7TBV2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_11s0016g04610#GO:0003676;GO:0000166#2F0P0C
AT5G19960.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr5:6744029-6746133 FORWARD LENGTH=337
Repeat List (scaffold3724)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35702.1	1	345	354	48.87	345	50	2e-77
Target_name	Start	End	Length	Cov(%)
sp\|D7TBV2_VITVI	1	330	347	95.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35702.1	1	343	354	40.39	343	41	8e-49
Target_name	Start	End	Length	Cov(%)
AT5G19960.1	1	323	337	95.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3724	Augus-PASA	mRNA	27039	30151	.	-	.	ID=Dca35702.1;Parent=Dca35702
scaffold3724	Augus-PASA	exon	27039	27101	.	-	.	ID=Dca35702.1.exon1;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	27408	27476	.	-	.	ID=Dca35702.1.exon2;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	27572	27637	.	-	.	ID=Dca35702.1.exon3;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	27741	27809	.	-	.	ID=Dca35702.1.exon4;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	28106	28156	.	-	.	ID=Dca35702.1.exon5;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	28272	28332	.	-	.	ID=Dca35702.1.exon6;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	28550	29025	.	-	.	ID=Dca35702.1.exon7;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	29124	29222	.	-	.	ID=Dca35702.1.exon8;Parent=Dca35702.1
scaffold3724	Augus-PASA	exon	30041	30151	.	-	.	ID=Dca35702.1.exon9;Parent=Dca35702.1