Carnation DB

Dca35704.1

Annotation

6-exons
f-1
sp|A9PAX2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_738036#GO:0016021;GO:0016192#0F1P1C
AT5G58060.2 | Symbols: YKT61, ATYKT61, ATGP1 | SNARE-like superfamily protein | chr5:23498277-23500128 FORWARD LENGTH=221
Repeat List (scaffold3725)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35704.1	1	199	199	84.92	199	85	3e-100
Target_name	Start	End	Length	Cov(%)
sp\|A9PAX2_POPTR	1	199	199	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca35704.1	1	199	199	80.9	199	73	2e-91
Target_name	Start	End	Length	Cov(%)
AT5G58060.2	1	221	221	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3725	Augus-PASA	mRNA	5239	12629	.	+	.	ID=Dca35704.1;Parent=Dca35704
scaffold3725	Augus-PASA	exon	5239	5431	.	+	.	ID=Dca35704.1.exon1;Parent=Dca35704.1
scaffold3725	Augus-PASA	exon	6770	6867	.	+	.	ID=Dca35704.1.exon2;Parent=Dca35704.1
scaffold3725	Augus-PASA	exon	8970	9074	.	+	.	ID=Dca35704.1.exon3;Parent=Dca35704.1
scaffold3725	Augus-PASA	exon	9249	9314	.	+	.	ID=Dca35704.1.exon4;Parent=Dca35704.1
scaffold3725	Augus-PASA	exon	10370	10456	.	+	.	ID=Dca35704.1.exon5;Parent=Dca35704.1
scaffold3725	Augus-PASA	exon	12579	12629	.	+	.	ID=Dca35704.1.exon6;Parent=Dca35704.1