Dca35847.1
Annotation
- 2-exons
- f-1
- sp|Q9ZPU4_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g13940#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3749)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35847.1 |
13 |
236 |
342 |
34.21 |
224 |
51 |
3e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZPU4_ARATH |
593 |
820 |
1501 |
15.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35847.1 |
25 |
243 |
342 |
21.34 |
219 |
34 |
2e-33
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
578 |
795 |
1428 |
15.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3749 |
Augustus |
mRNA |
15677 |
20432 |
. |
- |
. |
ID=Dca35847.1;Parent=Dca35847 |
| scaffold3749 |
Augustus |
exon |
15677 |
16629 |
. |
- |
. |
ID=Dca35847.1.exon1;Parent=Dca35847.1 |
| scaffold3749 |
Augustus |
exon |
20357 |
20432 |
. |
- |
. |
ID=Dca35847.1.exon2;Parent=Dca35847.1 |
