Carnation DB

Dca3587.1

Annotation

7-exons
f-1
sp|B9HJR3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766289#GO:0016020#0F0P1C
sp|B9SZH5_RICCO#Auxin-induced protein 5NG4, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0393280#GO:0016020#0F0P1C
Repeat List (scaffold1129)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3587.1	5	338	340	59.11	334	57	5e-107
Target_name	Start	End	Length	Cov(%)
sp\|B9HJR3_POPTR	6	353	355	98.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3587.1	2	336	340	43.82	335	42	4e-63
Target_name	Start	End	Length	Cov(%)
AT3G28050.1	7	361	367	96.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1129	Augustus	mRNA	61155	64392	.	+	.	ID=Dca3587.1;Parent=Dca3587
scaffold1129	Augustus	exon	61155	61333	.	+	.	ID=Dca3587.1.exon1;Parent=Dca3587.1
scaffold1129	Augustus	exon	61572	61637	.	+	.	ID=Dca3587.1.exon2;Parent=Dca3587.1
scaffold1129	Augustus	exon	62329	62400	.	+	.	ID=Dca3587.1.exon3;Parent=Dca3587.1
scaffold1129	Augustus	exon	62670	62910	.	+	.	ID=Dca3587.1.exon4;Parent=Dca3587.1
scaffold1129	Augustus	exon	62993	63151	.	+	.	ID=Dca3587.1.exon5;Parent=Dca3587.1
scaffold1129	Augustus	exon	63400	63551	.	+	.	ID=Dca3587.1.exon6;Parent=Dca3587.1
scaffold1129	Augustus	exon	64239	64392	.	+	.	ID=Dca3587.1.exon7;Parent=Dca3587.1