Dca35901.1
Annotation
- 3-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold3759)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35901.1 |
83 |
529 |
537 |
50.46 |
447 |
61 |
3e-162
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
288 |
731 |
1038 |
42.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca35901.1 |
132 |
529 |
537 |
24.95 |
398 |
33 |
4e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
361 |
762 |
1428 |
28.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3759 |
Augustus |
mRNA |
9222 |
11010 |
. |
+ |
. |
ID=Dca35901.1;Parent=Dca35901 |
| scaffold3759 |
Augustus |
exon |
9222 |
9309 |
. |
+ |
. |
ID=Dca35901.1.exon1;Parent=Dca35901.1 |
| scaffold3759 |
Augustus |
exon |
9412 |
9567 |
. |
+ |
. |
ID=Dca35901.1.exon2;Parent=Dca35901.1 |
| scaffold3759 |
Augustus |
exon |
9641 |
11010 |
. |
+ |
. |
ID=Dca35901.1.exon3;Parent=Dca35901.1 |
