Carnation DB

Dca3611.1

Annotation

7-exons
f-1
sp|B9GT61_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_798608#unknown#0F0P0C
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3611.1	77	182	191	32.46	106	57	2e-29
Target_name	Start	End	Length	Cov(%)
sp\|B9GT61_POPTR	10	119	239	46.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3611.1	1	68	191	17.8	68	50	4e-14
Target_name	Start	End	Length	Cov(%)
Os06t0581300-02	179	242	256	25

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	60370	63304	.	+	.	ID=Dca3611.1;Parent=Dca3611
scaffold113	Augustus	exon	60370	60449	.	+	.	ID=Dca3611.1.exon1;Parent=Dca3611.1
scaffold113	Augustus	exon	61024	61128	.	+	.	ID=Dca3611.1.exon2;Parent=Dca3611.1
scaffold113	Augustus	exon	61546	61686	.	+	.	ID=Dca3611.1.exon3;Parent=Dca3611.1
scaffold113	Augustus	exon	62015	62066	.	+	.	ID=Dca3611.1.exon4;Parent=Dca3611.1
scaffold113	Augustus	exon	62539	62612	.	+	.	ID=Dca3611.1.exon5;Parent=Dca3611.1
scaffold113	Augustus	exon	63045	63134	.	+	.	ID=Dca3611.1.exon6;Parent=Dca3611.1
scaffold113	Augustus	exon	63271	63304	.	+	.	ID=Dca3611.1.exon7;Parent=Dca3611.1