Carnation DB

Dca36137.1

Annotation

5-exons
f-1
sp|F6GTZ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g03170#GO:0008270;GO:0006355#1F1P0C
AT1G05055.1 | Symbols: ATGTF2H2, GTF2H2 | general transcription factor II H2 | chr1:1448913-1450852 REVERSE LENGTH=421
Repeat List (scaffold3791)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36137.1	2	408	446	70.4	407	77	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GTZ1_VITVI	1	411	433	94.91

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36137.1	33	408	446	65.47	376	78	2e-180
Target_name	Start	End	Length	Cov(%)
AT1G05055.1	23	399	421	89.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3791	Augustus	mRNA	11500	16095	.	+	.	ID=Dca36137.1;Parent=Dca36137
scaffold3791	Augustus	exon	11500	11805	.	+	.	ID=Dca36137.1.exon1;Parent=Dca36137.1
scaffold3791	Augustus	exon	11896	12357	.	+	.	ID=Dca36137.1.exon2;Parent=Dca36137.1
scaffold3791	Augustus	exon	12474	12849	.	+	.	ID=Dca36137.1.exon3;Parent=Dca36137.1
scaffold3791	Augustus	exon	13627	13707	.	+	.	ID=Dca36137.1.exon4;Parent=Dca36137.1
scaffold3791	Augustus	exon	15980	16095	.	+	.	ID=Dca36137.1.exon5;Parent=Dca36137.1