Dca36376.1
Annotation
- 4-exons
- f-1
- sp|B9SCE7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1271010#unknown#0F0P0C
- AT1G53645.1 | Symbols: | hydroxyproline-rich glycoprotein family protein | chr1:20026434-20028587 REVERSE LENGTH=523
- Repeat List (scaffold3815)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36376.1 |
95 |
467 |
468 |
36.32 |
373 |
44 |
3e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SCE7_RICCO |
94 |
435 |
436 |
78.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36376.1 |
228 |
468 |
468 |
28.2 |
241 |
51 |
2e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53645.1 |
264 |
523 |
523 |
49.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3815 |
Augustus |
mRNA |
9206 |
12066 |
. |
- |
. |
ID=Dca36376.1;Parent=Dca36376 |
| scaffold3815 |
Augustus |
exon |
9206 |
9286 |
. |
- |
. |
ID=Dca36376.1.exon1;Parent=Dca36376.1 |
| scaffold3815 |
Augustus |
exon |
9967 |
10152 |
. |
- |
. |
ID=Dca36376.1.exon2;Parent=Dca36376.1 |
| scaffold3815 |
Augustus |
exon |
10845 |
10994 |
. |
- |
. |
ID=Dca36376.1.exon3;Parent=Dca36376.1 |
| scaffold3815 |
Augustus |
exon |
11077 |
12066 |
. |
- |
. |
ID=Dca36376.1.exon4;Parent=Dca36376.1 |
