Carnation DB

Dca3640.1

Annotation

5-exons
f-1
sp|Q49TU9_LILLO#Pollen-specific SGT1#Lilium longiflorum (Trumpet lily)#unknown#GO:0005488#1F0P0C
Repeat List (scaffold113)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3640.1	6	190	195	40.51	185	41	9e-30
Target_name	Start	End	Length	Cov(%)
sp\|Q49TU9_LILLO	75	256	361	50.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3640.1	12	166	195	29.74	155	35	6e-24
Target_name	Start	End	Length	Cov(%)
AT4G23570.3	70	231	351	46.15

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold113	Augustus	mRNA	357442	359258	.	-	.	ID=Dca3640.1;Parent=Dca3640
scaffold113	Augustus	exon	357442	357600	.	-	.	ID=Dca3640.1.exon1;Parent=Dca3640.1
scaffold113	Augustus	exon	358206	358271	.	-	.	ID=Dca3640.1.exon2;Parent=Dca3640.1
scaffold113	Augustus	exon	358361	358457	.	-	.	ID=Dca3640.1.exon3;Parent=Dca3640.1
scaffold113	Augustus	exon	358581	358659	.	-	.	ID=Dca3640.1.exon4;Parent=Dca3640.1
scaffold113	Augustus	exon	359072	359258	.	-	.	ID=Dca3640.1.exon5;Parent=Dca3640.1