Carnation DB

Dca3647.1

Annotation

5-exons
f-1
sp|B9HXA3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_565466#unknown#0F0P0C
AT5G30495.2 | Symbols: | Fcf2 pre-rRNA processing protein | chr5:11380190-11381391 FORWARD LENGTH=196
Repeat List (scaffold1130)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3647.1	7	195	195	62.05	189	64	1e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9HXA3_POPTR	1	190	190	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3647.1	1	186	195	60	186	63	3e-63
Target_name	Start	End	Length	Cov(%)
AT5G30495.2	1	188	196	95.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1130	Augustus	mRNA	52254	58745	.	+	.	ID=Dca3647.1;Parent=Dca3647
scaffold1130	Augustus	exon	52254	52480	.	+	.	ID=Dca3647.1.exon1;Parent=Dca3647.1
scaffold1130	Augustus	exon	52630	52690	.	+	.	ID=Dca3647.1.exon2;Parent=Dca3647.1
scaffold1130	Augustus	exon	58270	58347	.	+	.	ID=Dca3647.1.exon3;Parent=Dca3647.1
scaffold1130	Augustus	exon	58434	58546	.	+	.	ID=Dca3647.1.exon4;Parent=Dca3647.1
scaffold1130	Augustus	exon	58637	58745	.	+	.	ID=Dca3647.1.exon5;Parent=Dca3647.1