Dca36545.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold3845)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36545.1 |
26 |
268 |
377 |
30.23 |
243 |
41 |
2e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
450 |
728 |
1717 |
16.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36545.1 |
73 |
165 |
377 |
7.69 |
93 |
32 |
2e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3845 |
Augustus |
mRNA |
21269 |
22656 |
. |
+ |
. |
ID=Dca36545.1;Parent=Dca36545 |
| scaffold3845 |
Augustus |
exon |
21269 |
21341 |
. |
+ |
. |
ID=Dca36545.1.exon1;Parent=Dca36545.1 |
| scaffold3845 |
Augustus |
exon |
21504 |
21927 |
. |
+ |
. |
ID=Dca36545.1.exon2;Parent=Dca36545.1 |
| scaffold3845 |
Augustus |
exon |
22020 |
22656 |
. |
+ |
. |
ID=Dca36545.1.exon3;Parent=Dca36545.1 |
