Carnation DB

Dca36672.1

Annotation

6-exons
f-1
sp|B9I5E1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_571019#GO:0003677#1F0P0C
AT5G28300.1 | Symbols: | Duplicated homeodomain-like superfamily protein | chr5:10292789-10295101 REVERSE LENGTH=619
Repeat List (scaffold387)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36672.1	1	634	867	32.17	634	42	6e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9I5E1_POPTR	1	612	626	97.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca36672.1	1	585	867	26.29	585	37	3e-78
Target_name	Start	End	Length	Cov(%)
AT5G28300.1	1	557	619	89.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold387	Augustus	mRNA	57743	69675	.	-	.	ID=Dca36672.1;Parent=Dca36672
scaffold387	Augustus	exon	57743	58147	.	-	.	ID=Dca36672.1.exon1;Parent=Dca36672.1
scaffold387	Augustus	exon	58234	58338	.	-	.	ID=Dca36672.1.exon2;Parent=Dca36672.1
scaffold387	Augustus	exon	58451	58570	.	-	.	ID=Dca36672.1.exon3;Parent=Dca36672.1
scaffold387	Augustus	exon	58669	58742	.	-	.	ID=Dca36672.1.exon4;Parent=Dca36672.1
scaffold387	Augustus	exon	67367	68904	.	-	.	ID=Dca36672.1.exon5;Parent=Dca36672.1
scaffold387	Augustus	exon	69314	69675	.	-	.	ID=Dca36672.1.exon6;Parent=Dca36672.1