Dca3679.1
Annotation
- 2-exons
- f-1
- sp|Q2QRM1_ORYSJ#Retrotransposon protein, putative, Ty1-copia subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g27096#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold11315)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca3679.1 |
15 |
139 |
202 |
35.64 |
125 |
57 |
1e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QRM1_ORYSJ |
1574 |
1700 |
1745 |
7.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
No data
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11315 |
Augustus |
mRNA |
12527 |
13249 |
. |
+ |
. |
ID=Dca3679.1;Parent=Dca3679 |
| scaffold11315 |
Augustus |
exon |
12527 |
12805 |
. |
+ |
. |
ID=Dca3679.1.exon1;Parent=Dca3679.1 |
| scaffold11315 |
Augustus |
exon |
12920 |
13249 |
. |
+ |
. |
ID=Dca3679.1.exon2;Parent=Dca3679.1 |
