Dca36882.1
Annotation
- 3-exons
- f-1
- sp|B9HUE7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_822559#GO:0016471;GO:0016820;GO:0015992#1F1P1C
- Os04t0601700-02 Similar to Vacuolar ATP synthase subunit G 1 (EC 3.6.3.14) (V-ATPase G subunit 1) (Vacuolar proton pump G subunit 1).
- Repeat List (scaffold39)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36882.1 |
4 |
113 |
113 |
77.87 |
110 |
80 |
1e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HUE7_POPTR |
1 |
110 |
110 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca36882.1 |
4 |
113 |
113 |
76.1 |
110 |
79 |
6e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0601700-02 |
1 |
110 |
111 |
99.09 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold39 |
Augustus |
mRNA |
356227 |
358252 |
. |
+ |
. |
ID=Dca36882.1;Parent=Dca36882 |
| scaffold39 |
Augustus |
exon |
356227 |
356323 |
. |
+ |
. |
ID=Dca36882.1.exon1;Parent=Dca36882.1 |
| scaffold39 |
Augus-PASA |
exon |
357285 |
357385 |
. |
+ |
. |
ID=Dca36882.1.exon2;Parent=Dca36882.1 |
| scaffold39 |
Augus-PASA |
exon |
358109 |
358252 |
. |
+ |
. |
ID=Dca36882.1.exon3;Parent=Dca36882.1 |
