Carnation DB

Dca37406.1

Annotation

6-exons
f-1
sp|A9PIK2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_547984#unknown#0F0P0C
AT4G13710.1 | Symbols: | Pectin lyase-like superfamily protein | chr4:7962550-7966012 FORWARD LENGTH=470
Repeat List (scaffold3987)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37406.1	1	397	397	83.12	397	83	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PIK2_POPTR	53	450	450	88.44

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37406.1	13	397	397	78.08	385	80	0
Target_name	Start	End	Length	Cov(%)
AT4G13710.1	81	470	470	82.97

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold3987	Augustus	mRNA	24582	34027	.	+	.	ID=Dca37406.1;Parent=Dca37406
scaffold3987	Augustus	exon	24582	24592	.	+	.	ID=Dca37406.1.exon1;Parent=Dca37406.1
scaffold3987	Augus-PASA	exon	28035	28109	.	+	.	ID=Dca37406.1.exon2;Parent=Dca37406.1
scaffold3987	Augus-PASA	exon	32597	33239	.	+	.	ID=Dca37406.1.exon3;Parent=Dca37406.1
scaffold3987	Augustus	exon	33326	33429	.	+	.	ID=Dca37406.1.exon4;Parent=Dca37406.1
scaffold3987	Augustus	exon	33554	33692	.	+	.	ID=Dca37406.1.exon5;Parent=Dca37406.1
scaffold3987	Augustus	exon	33806	34027	.	+	.	ID=Dca37406.1.exon6;Parent=Dca37406.1