Dca37413.1
Annotation
- 4-exons
- f-1
- sp|A9PCC6_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#unknown#0F0P0C
- AT5G51700.1 | Symbols: PBS2, ATRAR1, RPR2, RAR1 | protein binding;zinc ion binding | chr5:21001373-21003143 REVERSE LENGTH=226
- Repeat List (scaffold3988)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37413.1 |
116 |
175 |
181 |
13.81 |
60 |
42 |
3e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PCC6_POPTR |
11 |
70 |
215 |
27.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37413.1 |
116 |
175 |
181 |
11.6 |
60 |
35 |
7e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G51700.1 |
12 |
71 |
226 |
26.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold3988 |
Augustus |
mRNA |
24419 |
25666 |
. |
- |
. |
ID=Dca37413.1;Parent=Dca37413 |
| scaffold3988 |
Augustus |
exon |
24419 |
24514 |
. |
- |
. |
ID=Dca37413.1.exon1;Parent=Dca37413.1 |
| scaffold3988 |
Augustus |
exon |
24724 |
24944 |
. |
- |
. |
ID=Dca37413.1.exon2;Parent=Dca37413.1 |
| scaffold3988 |
Augustus |
exon |
25070 |
25233 |
. |
- |
. |
ID=Dca37413.1.exon3;Parent=Dca37413.1 |
| scaffold3988 |
Augustus |
exon |
25602 |
25666 |
. |
- |
. |
ID=Dca37413.1.exon4;Parent=Dca37413.1 |
