Carnation DB

Dca37599.1

Annotation

8-exons
f-1
sp|B9HDB8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_561627#GO:0008318;GO:0018342#1F1P0C
AT4G24490.1 | Symbols: RGTA1, ATRGTA1 | RAB geranylgeranyl transferase alpha subunit 1 | chr4:12655330-12658103 REVERSE LENGTH=678
Repeat List (scaffold40)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37599.1	1	685	685	56.49	685	55	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HDB8_POPTR	1	695	696	99.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37599.1	1	681	685	50.94	681	50	5e-177
Target_name	Start	End	Length	Cov(%)
AT4G24490.1	1	671	678	98.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold40	Augustus	mRNA	21652	26261	.	+	.	ID=Dca37599.1;Parent=Dca37599
scaffold40	Augustus	exon	21652	21767	.	+	.	ID=Dca37599.1.exon1;Parent=Dca37599.1
scaffold40	Augustus	exon	21887	22040	.	+	.	ID=Dca37599.1.exon2;Parent=Dca37599.1
scaffold40	Augustus	exon	22951	23111	.	+	.	ID=Dca37599.1.exon3;Parent=Dca37599.1
scaffold40	Augustus	exon	23196	23300	.	+	.	ID=Dca37599.1.exon4;Parent=Dca37599.1
scaffold40	Augustus	exon	23420	24172	.	+	.	ID=Dca37599.1.exon5;Parent=Dca37599.1
scaffold40	Augustus	exon	24300	24492	.	+	.	ID=Dca37599.1.exon6;Parent=Dca37599.1
scaffold40	Augustus	exon	25185	25371	.	+	.	ID=Dca37599.1.exon7;Parent=Dca37599.1
scaffold40	Augustus	exon	25873	26261	.	+	.	ID=Dca37599.1.exon8;Parent=Dca37599.1