Carnation DB

Dca37791.1

Annotation

13-exons
f-1
sp|D7L6H5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_896875#unknown#0F0P0C
AT3G07180.1 | Symbols: | GPI transamidase component PIG-S-related | chr3:2282455-2285475 REVERSE LENGTH=599
Repeat List (scaffold402)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37791.1	36	616	620	58.54	581	62	0
Target_name	Start	End	Length	Cov(%)
sp\|D7L6H5_ARALL	17	596	599	96.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca37791.1	36	616	620	57.74	581	61	0
Target_name	Start	End	Length	Cov(%)
AT3G07180.1	17	596	599	96.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold402	Augustus	mRNA	47244	55771	.	+	.	ID=Dca37791.1;Parent=Dca37791
scaffold402	Augustus	exon	47244	47430	.	+	.	ID=Dca37791.1.exon1;Parent=Dca37791.1
scaffold402	Augustus	exon	47919	48612	.	+	.	ID=Dca37791.1.exon2;Parent=Dca37791.1
scaffold402	Augustus	exon	49788	49872	.	+	.	ID=Dca37791.1.exon3;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	50015	50104	.	+	.	ID=Dca37791.1.exon4;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	50633	50706	.	+	.	ID=Dca37791.1.exon5;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	51447	51531	.	+	.	ID=Dca37791.1.exon6;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	51606	51695	.	+	.	ID=Dca37791.1.exon7;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	51889	52019	.	+	.	ID=Dca37791.1.exon8;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	53850	53931	.	+	.	ID=Dca37791.1.exon9;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	54033	54080	.	+	.	ID=Dca37791.1.exon10;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	54898	54970	.	+	.	ID=Dca37791.1.exon11;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	55057	55160	.	+	.	ID=Dca37791.1.exon12;Parent=Dca37791.1
scaffold402	Augus-PASA	exon	55652	55771	.	+	.	ID=Dca37791.1.exon13;Parent=Dca37791.1