Carnation DB

Dca3792.1

Annotation

5-exons
f-1
sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
Repeat List (scaffold1137)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3792.1	231	310	378	13.75	80	65	2e-25
Target_name	Start	End	Length	Cov(%)
sp\|G9FIF2_BETVU	1149	1228	1553	5.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3792.1	234	309	378	9.52	76	48	2e-13
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1114	1188	1539	4.87

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1137	Augustus	mRNA	41360	45996	.	+	.	ID=Dca3792.1;Parent=Dca3792
scaffold1137	Augustus	exon	41360	41476	.	+	.	ID=Dca3792.1.exon1;Parent=Dca3792.1
scaffold1137	Augustus	exon	42181	42395	.	+	.	ID=Dca3792.1.exon2;Parent=Dca3792.1
scaffold1137	Augustus	exon	43441	43801	.	+	.	ID=Dca3792.1.exon3;Parent=Dca3792.1
scaffold1137	Augustus	exon	45461	45716	.	+	.	ID=Dca3792.1.exon4;Parent=Dca3792.1
scaffold1137	Augustus	exon	45809	45996	.	+	.	ID=Dca3792.1.exon5;Parent=Dca3792.1