Dca37971.1
Annotation
- 4-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q2AA50_ASPOF#Retrotransposon gag protein#Asparagus officinalis (Garden asparagus)#ORFNames=19.t00014#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4048)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37971.1 |
293 |
644 |
779 |
22.2 |
352 |
47 |
4e-69
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
292 |
654 |
1717 |
21.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca37971.1 |
468 |
584 |
779 |
4.74 |
117 |
32 |
1e-09
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
76 |
189 |
192 |
59.37 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4048 |
Augustus |
mRNA |
5079 |
11943 |
. |
- |
. |
ID=Dca37971.1;Parent=Dca37971 |
| scaffold4048 |
Augustus |
exon |
5079 |
5492 |
. |
- |
. |
ID=Dca37971.1.exon1;Parent=Dca37971.1 |
| scaffold4048 |
Augustus |
exon |
5638 |
6728 |
. |
- |
. |
ID=Dca37971.1.exon2;Parent=Dca37971.1 |
| scaffold4048 |
Augustus |
exon |
10852 |
11598 |
. |
- |
. |
ID=Dca37971.1.exon3;Parent=Dca37971.1 |
| scaffold4048 |
Augustus |
exon |
11856 |
11943 |
. |
- |
. |
ID=Dca37971.1.exon4;Parent=Dca37971.1 |
