Carnation DB

Dca38165.1

Annotation

20-exons
f-1
sp|G5DWC3_SILLA#AP-1 complex subunit gamma-1#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0030131;GO:0044431;GO:0005488;GO:0008565;GO:0006886;GO:0016192#2F2P2C
Repeat List (scaffold408)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38165.1	621	1488	1488	51.88	868	89	0
Target_name	Start	End	Length	Cov(%)
sp\|G5DWC3_SILLA	23	878	878	97.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38165.1	621	1488	1488	42.8	868	71	0
Target_name	Start	End	Length	Cov(%)
AT1G60070.2	23	898	898	97.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold408	Augustus	mRNA	84401	101950	.	-	.	ID=Dca38165.1;Parent=Dca38165
scaffold408	Augustus	exon	84401	84496	.	-	.	ID=Dca38165.1.exon1;Parent=Dca38165.1
scaffold408	Augustus	exon	84650	84754	.	-	.	ID=Dca38165.1.exon2;Parent=Dca38165.1
scaffold408	Augustus	exon	85292	85467	.	-	.	ID=Dca38165.1.exon3;Parent=Dca38165.1
scaffold408	Augustus	exon	85551	85799	.	-	.	ID=Dca38165.1.exon4;Parent=Dca38165.1
scaffold408	Augustus	exon	86267	86529	.	-	.	ID=Dca38165.1.exon5;Parent=Dca38165.1
scaffold408	Augustus	exon	86658	86762	.	-	.	ID=Dca38165.1.exon6;Parent=Dca38165.1
scaffold408	Augustus	exon	86898	87025	.	-	.	ID=Dca38165.1.exon7;Parent=Dca38165.1
scaffold408	Augustus	exon	87180	87275	.	-	.	ID=Dca38165.1.exon8;Parent=Dca38165.1
scaffold408	Augustus	exon	87370	87492	.	-	.	ID=Dca38165.1.exon9;Parent=Dca38165.1
scaffold408	Augustus	exon	87621	87675	.	-	.	ID=Dca38165.1.exon10;Parent=Dca38165.1
scaffold408	Augustus	exon	87985	88148	.	-	.	ID=Dca38165.1.exon11;Parent=Dca38165.1
scaffold408	Augustus	exon	88817	88907	.	-	.	ID=Dca38165.1.exon12;Parent=Dca38165.1
scaffold408	Augustus	exon	89760	89914	.	-	.	ID=Dca38165.1.exon13;Parent=Dca38165.1
scaffold408	Augustus	exon	90735	90914	.	-	.	ID=Dca38165.1.exon14;Parent=Dca38165.1
scaffold408	Augustus	exon	91050	91223	.	-	.	ID=Dca38165.1.exon15;Parent=Dca38165.1
scaffold408	Augustus	exon	91530	91697	.	-	.	ID=Dca38165.1.exon16;Parent=Dca38165.1
scaffold408	Augustus	exon	91799	92076	.	-	.	ID=Dca38165.1.exon17;Parent=Dca38165.1
scaffold408	Augustus	exon	97800	98547	.	-	.	ID=Dca38165.1.exon18;Parent=Dca38165.1
scaffold408	Augustus	exon	98680	99641	.	-	.	ID=Dca38165.1.exon19;Parent=Dca38165.1
scaffold408	Augustus	exon	101800	101950	.	-	.	ID=Dca38165.1.exon20;Parent=Dca38165.1