Carnation DB

Dca3831.1

Annotation

6-exons
f-1
sp|B9SVW8_RICCO#Geranylgeranyl pyrophosphate synthase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0747390#GO:0000010;GO:0008299#1F1P0C
Repeat List (scaffold1138)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3831.1	1	175	210	34.76	175	42	8e-24
Target_name	Start	End	Length	Cov(%)
sp\|B9SVW8_RICCO	2	128	417	30.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca3831.1	120	175	210	21.9	56	83	5e-21
Target_name	Start	End	Length	Cov(%)
Os06t0678200-01	86	141	431	12.99

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1138	Augustus	mRNA	3208	5987	.	-	.	ID=Dca3831.1;Parent=Dca3831
scaffold1138	Augustus	exon	3208	3324	.	-	.	ID=Dca3831.1.exon1;Parent=Dca3831.1
scaffold1138	Augustus	exon	3930	4001	.	-	.	ID=Dca3831.1.exon2;Parent=Dca3831.1
scaffold1138	Augustus	exon	4085	4165	.	-	.	ID=Dca3831.1.exon3;Parent=Dca3831.1
scaffold1138	Augustus	exon	4251	4331	.	-	.	ID=Dca3831.1.exon4;Parent=Dca3831.1
scaffold1138	Augustus	exon	5153	5290	.	-	.	ID=Dca3831.1.exon5;Parent=Dca3831.1
scaffold1138	Augustus	exon	5844	5987	.	-	.	ID=Dca3831.1.exon6;Parent=Dca3831.1