Dca38375.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4103)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38375.1 |
194 |
761 |
764 |
36.78 |
568 |
46 |
1e-149
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
148 |
739 |
1501 |
39.44 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38375.1 |
371 |
763 |
764 |
18.58 |
393 |
37 |
9e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
401 |
767 |
1539 |
23.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4103 |
Augustus |
mRNA |
52539 |
55214 |
. |
+ |
. |
ID=Dca38375.1;Parent=Dca38375 |
| scaffold4103 |
Augustus |
exon |
52539 |
53036 |
. |
+ |
. |
ID=Dca38375.1.exon1;Parent=Dca38375.1 |
| scaffold4103 |
Augustus |
exon |
53126 |
53189 |
. |
+ |
. |
ID=Dca38375.1.exon2;Parent=Dca38375.1 |
| scaffold4103 |
Augustus |
exon |
53483 |
55214 |
. |
+ |
. |
ID=Dca38375.1.exon3;Parent=Dca38375.1 |
