Dca38505.1
Annotation
- 2-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4127)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38505.1 |
1 |
207 |
207 |
65.7 |
207 |
58 |
3e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1229 |
1464 |
1553 |
15.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38505.1 |
72 |
191 |
207 |
30.43 |
120 |
43 |
1e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
5 |
153 |
230 |
64.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4127 |
Augustus |
mRNA |
11530 |
12240 |
. |
+ |
. |
ID=Dca38505.1;Parent=Dca38505 |
| scaffold4127 |
Augustus |
exon |
11530 |
11907 |
. |
+ |
. |
ID=Dca38505.1.exon1;Parent=Dca38505.1 |
| scaffold4127 |
Augustus |
exon |
11995 |
12240 |
. |
+ |
. |
ID=Dca38505.1.exon2;Parent=Dca38505.1 |
