Carnation DB

Dca38554.1

Annotation

9-exons
f-1
sp|F6I0Q2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0038g04040#GO:0004046;GO:0008237;GO:0006520;GO:0006508#2F2P0C
AT4G38220.2 | Symbols: | Peptidase M20/M25/M40 family protein | chr4:17925251-17926919 FORWARD LENGTH=433
Repeat List (scaffold4131)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38554.1	223	340	701	11.41	118	68	3e-42
Target_name	Start	End	Length	Cov(%)
sp\|F6I0Q2_VITVI	361	478	478	24.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38554.1	190	340	701	10.98	151	51	5e-35
Target_name	Start	End	Length	Cov(%)
AT4G38220.2	295	433	433	32.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4131	Augustus	mRNA	1	6320	.	-	.	ID=Dca38554.1;Parent=Dca38554
scaffold4131	Augustus	exon	1	221	.	-	.	ID=Dca38554.1.exon1;Parent=Dca38554.1
scaffold4131	Augustus	exon	930	1067	.	-	.	ID=Dca38554.1.exon2;Parent=Dca38554.1
scaffold4131	Augustus	exon	1622	2074	.	-	.	ID=Dca38554.1.exon3;Parent=Dca38554.1
scaffold4131	Augustus	exon	2215	2488	.	-	.	ID=Dca38554.1.exon4;Parent=Dca38554.1
scaffold4131	Augustus	exon	3391	3500	.	-	.	ID=Dca38554.1.exon5;Parent=Dca38554.1
scaffold4131	Augustus	exon	3604	3843	.	-	.	ID=Dca38554.1.exon6;Parent=Dca38554.1
scaffold4131	Augus-PASA	exon	5120	5359	.	-	.	ID=Dca38554.1.exon7;Parent=Dca38554.1
scaffold4131	Augus-PASA	exon	5700	5837	.	-	.	ID=Dca38554.1.exon8;Parent=Dca38554.1
scaffold4131	Augus-PASA	exon	6030	6320	.	-	.	ID=Dca38554.1.exon9;Parent=Dca38554.1