Carnation DB

Dca38612.1

Annotation

7-exons
f-1
sp|B9SJ33_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0598070#GO:0005643;GO:0017056;GO:0006913#1F1P1C
AT1G14850.1 | Symbols: NUP155 | nucleoporin 155 | chr1:5116921-5123259 REVERSE LENGTH=1464
Repeat List (scaffold414)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38612.1	1	138	615	11.7	138	53	2e-26
Target_name	Start	End	Length	Cov(%)
sp\|B9SJ33_RICCO	1274	1410	1490	9.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca38612.1	1	138	615	11.7	138	53	4e-33
Target_name	Start	End	Length	Cov(%)
AT1G14850.1	1252	1387	1464	9.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold414	Augustus	mRNA	98958	101848	.	-	.	ID=Dca38612.1;Parent=Dca38612
scaffold414	Augustus	exon	98958	99729	.	-	.	ID=Dca38612.1.exon1;Parent=Dca38612.1
scaffold414	Augustus	exon	99801	100042	.	-	.	ID=Dca38612.1.exon2;Parent=Dca38612.1
scaffold414	Augustus	exon	100150	100282	.	-	.	ID=Dca38612.1.exon3;Parent=Dca38612.1
scaffold414	Augustus	exon	100359	100528	.	-	.	ID=Dca38612.1.exon4;Parent=Dca38612.1
scaffold414	Augustus	exon	100643	100760	.	-	.	ID=Dca38612.1.exon5;Parent=Dca38612.1
scaffold414	Augustus	exon	101364	101566	.	-	.	ID=Dca38612.1.exon6;Parent=Dca38612.1
scaffold414	Augustus	exon	101639	101848	.	-	.	ID=Dca38612.1.exon7;Parent=Dca38612.1