Dca38633.1
Annotation
- 2-exons
- f-1
- sp|Q949J4_SOLLC#Putative copia-like polyprotein#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#unknown#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4142)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38633.1 |
1 |
357 |
367 |
62.39 |
357 |
64 |
5e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q949J4_SOLLC |
144 |
500 |
779 |
45.82 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca38633.1 |
168 |
356 |
367 |
16.89 |
189 |
30 |
3e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
22 |
213 |
1262 |
15.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4142 |
Augustus |
mRNA |
4420 |
5767 |
. |
- |
. |
ID=Dca38633.1;Parent=Dca38633 |
| scaffold4142 |
Augustus |
exon |
4420 |
4452 |
. |
- |
. |
ID=Dca38633.1.exon1;Parent=Dca38633.1 |
| scaffold4142 |
Augustus |
exon |
4697 |
5767 |
. |
- |
. |
ID=Dca38633.1.exon2;Parent=Dca38633.1 |
